MA_10426266g0010


Description : component Magoh of RNA quality control Exon Junction complex


Gene families : OG_01_0004894 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004894_tree ,
OG_02_0005301 (LandPlants) Phylogenetic Tree(s): OG_02_0005301_tree ,
OG_03_0007954 (SeedPlants) Phylogenetic Tree(s): OG_03_0007954_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426266g0010
Cluster HCCA: Cluster_415

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00121p00130180 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 Archaeplastida
Cre09.g392692 No alias RNA processing.RNA quality control Exon Junction complex... 0.04 Archaeplastida
LOC_Os08g01660.1 No alias component Magoh of RNA quality control Exon Junction complex 0.02 Archaeplastida
LOC_Os12g18880.1 No alias component Magoh of RNA quality control Exon Junction complex 0.03 Archaeplastida
Pp3c1_16390V3.1 No alias mago nashi family protein 0.02 Archaeplastida
Pp3c1_16440V3.1 No alias mago nashi family protein 0.04 Archaeplastida
Pp3c2_21720V3.1 No alias mago nashi family protein 0.06 Archaeplastida
AMTR_s00121p00130180 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 LandPlants
LOC_Os08g01660.1 No alias component Magoh of RNA quality control Exon Junction complex 0.02 LandPlants
LOC_Os12g18880.1 No alias component Magoh of RNA quality control Exon Junction complex 0.03 LandPlants
Pp3c1_16440V3.1 No alias mago nashi family protein 0.03 LandPlants
Pp3c2_21720V3.1 No alias mago nashi family protein 0.04 LandPlants
AMTR_s00121p00130180 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 SeedPlants
LOC_Os08g01660.1 No alias component Magoh of RNA quality control Exon Junction complex 0.02 SeedPlants
LOC_Os12g18880.1 No alias component Magoh of RNA quality control Exon Junction complex 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEA Interproscan
CC GO:0035145 exon-exon junction complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004023 Mago_nashi 8 133
No external refs found!