Azfi_s0037.g025874

Description : E3 ubiquitin ligase & original description: CDS=290-1723

Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0037.g025874
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00170p00024360	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
Aspi01Gene09773.t1	Aspi01Gene09773	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.16G080400.1	Ceric.16G080400	not classified & original description: pacid=50588988...	0.04	OrthoFinder output from all 47 species
Dcu_g02898	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g16777	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009961	No alias	E3 ubiquitin ligase & original description: CDS=391-1818	0.03	OrthoFinder output from all 47 species
Solyc06g076610.3.1	Solyc06g076610	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	267	314

External Links

No external refs found!