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  5. Azfi_s0035.g025556

Azfi_s0035.g025556 (ATPRMT5, PRMT5, SKB1)


Aliases : ATPRMT5, PRMT5, SKB1

Description : histone methylase *(CAU1/PRMT5) & original description: CDS=195-2255


Gene families : OG0005523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0035.g025556
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT4G31120 ATPRMT5, PRMT5, SKB1 SHK1 binding protein 1 0.04 OrthoFinder output from all 47 species
Als_g32065 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G021300.1 ATPRMT5, PRMT5,... histone methylase *(CAU1/PRMT5) & original description:... 0.06 OrthoFinder output from all 47 species
Gb_23660 ATPRMT5, PRMT5, SKB1 arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.02 OrthoFinder output from all 47 species
LOC_Os02g04660.1 ATPRMT5, PRMT5,... arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.03 OrthoFinder output from all 47 species
Msp_g15862 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020227 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g41746 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR035247 PRMT5_TIM 37 311
IPR035248 PRMT5_C 490 684
IPR035075 PRMT5 318 487
No external refs found!