Solyc08g066500.3.1 (Solyc08g066500.3)


Aliases : Solyc08g066500.3

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Member of the class III HD-ZIP protein family.


Gene families : OG_01_0000594 (Gene family) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g066500.3.1
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.05 Gene family
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.11 Gene family
GSVIVT01017010001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
GSVIVT01025193001 No alias 33.99 development.unspecified REVOLUTA regulates... 0.09 Gene family
LOC_Os03g43930 Os03g0640800 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os10g33960 Os10g0480200 33.99 development.unspecified REVOLUTA regulates... 0.02 Gene family
MA_10427484g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Solyc02g024070.3.1 Solyc02g024070.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc02g069830.3.1 Solyc02g069830.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d008869 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d013699 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.06 Gene family
Zm00001d027317 GRMZM2G042250 33.99 development.unspecified REVOLUTA regulates... 0.05 Gene family
Zm00001d031061 GRMZM2G003509 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family
Zm00001d033246 GRMZM2G023291,... 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.06 Gene family
Zm00001d048527 GRMZM2G109987 33.99 development.unspecified REVOLUTA regulates... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 163 371
IPR001356 Homeobox_dom 18 76
IPR013978 MEKHLA 711 853
No external refs found!