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  5. Azfi_s0033.g025062

Azfi_s0033.g025062


Description : histone demethylase *(JMJD6) & original description: CDS=158-1753


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0033.g025062

Target Alias Description ECC score Gene Family Method Actions
Adi_g009966 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.44 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp1g25060.1 No alias histone demethylase (JMJD6). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
CC GO:0009360 DNA polymerase III complex IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR041667 Cupin_8 228 447
IPR001810 F-box_dom 116 156
No external refs found!