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  5. Azfi_s0032.g024984

Azfi_s0032.g024984 (UBC10)


Aliases : UBC10

Description : E2 MUB ubiquitin-conjugating enzyme & original description: CDS=237-683


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0032.g024984
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.03 OrthoFinder output from all 47 species
Aop_g28213 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71425.t1 ATUBC8, UBC8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71748.t1 ATUBC8, UBC8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G027200.1 ATUBC11, UBC11,... E2 MUB ubiquitin-conjugating enzyme & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06402 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29627 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027045001 UBC10 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Gb_07393 ATUBC11, UBC11 Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g31624 ATUBC8, UBC8 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g083570.3.1 UBC10, Solyc02g083570 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g02567 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!