Azfi_s0032.g024796 (CDC23, APC8)

Aliases : CDC23, APC8

Description : component *(APC8) of (APC/C)-dependent ubiquitination arc lamp subcomplex & original description: CDS=260-1075

Gene families : OG0005671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005671_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0032.g024796
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene70021.t1	CDC23, APC8,...	component *(APC8) of (APC/C)-dependent ubiquitination...	0.05	OrthoFinder output from all 47 species
Gb_03388	CDC23, APC8	component APC8 of (APC/C)-dependent ubiquitination arc...	0.02	OrthoFinder output from all 47 species
Pir_g18807	CDC23, APC8	component *(APC8) of (APC/C)-dependent ubiquitination...	0.04	OrthoFinder output from all 47 species
Solyc03g113740.4.1	CDC23, APC8,...	component APC8 of (APC/C)-dependent ubiquitination arc...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
CC	GO:0000152	nuclear ubiquitin ligase complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005680	anaphase-promoting complex	IEA	Interproscan
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEA	Interproscan
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0033045	regulation of sister chromatid segregation	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0051983	regulation of chromosome segregation	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901990	regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004470	malic enzyme activity	IEP	HCCA
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	HCCA
MF	GO:0016615	malate dehydrogenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019734	TPR_repeat	324	356
IPR019734	TPR_repeat	185	216
IPR019734	TPR_repeat	286	316
IPR007192	APC8	146	242

External Links

No external refs found!

Azfi_s0032.g024796 (CDC23, APC8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation