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  5. Azfi_s0032.g024585

Azfi_s0032.g024585


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-897


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0032.g024585

Target Alias Description ECC score Gene Family Method Actions
Aop_g12201 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14817.t1 Aspi01Gene14817 E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G013000.1 Ceric.19G013000 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G005100.1 Ceric.20G005100 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.05 OrthoFinder output from all 47 species
Len_g01102 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03115 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12014 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13792 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005822 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-546 0.03 OrthoFinder output from all 47 species
Solyc02g078320.3.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g10565 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 122 161
No external refs found!