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  5. Azfi_s0030.g024406

Azfi_s0030.g024406 (EMB976)


Aliases : EMB976

Description : plastidial splicing factor *(PDM4) & original description: CDS=108-2372


Gene families : OG0007469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0030.g024406

Target Alias Description ECC score Gene Family Method Actions
Ceric.11G008200.1 EMB976, Ceric.11G008200 plastidial splicing factor *(PDM4) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02120.1 EMB976, LOC_Os06g02120 Pentatricopeptide repeat-containing protein At5g27270... 0.03 OrthoFinder output from all 47 species
Spa_g06898 EMB976 plastidial splicing factor *(PDM4) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 574 599
IPR002885 Pentatricopeptide_repeat 225 253
IPR002885 Pentatricopeptide_repeat 671 699
IPR002885 Pentatricopeptide_repeat 611 631
IPR002885 Pentatricopeptide_repeat 489 534
IPR002885 Pentatricopeptide_repeat 386 443
IPR002885 Pentatricopeptide_repeat 292 337
No external refs found!