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  5. Ehy_g03255

Ehy_g03255


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g03255

Target Alias Description ECC score Gene Family Method Actions
AT1G24620 No alias EF hand calcium-binding protein family 0.02 OrthoFinder output from all 47 species
AT3G03430 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Ceric.18G075900.1 Ceric.18G075900 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Gb_03900 CML23 Probable calcium-binding protein CML25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g44660.1 APC1, PC1, LOC_Os08g44660 Polcalcin Phl p 7 OS=Phleum pratense... 0.03 OrthoFinder output from all 47 species
Pnu_g27722 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g063340.1.1 Solyc02g063340 Polcalcin Nic t 2 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 146 208
IPR002048 EF_hand_dom 72 131
No external refs found!