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  5. Azfi_s0028.g023894

Azfi_s0028.g023894


Description : not classified & original description: CDS=1-2331


Gene families : OG0008372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0028.g023894
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Als_g01113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015378001 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.07 OrthoFinder output from all 47 species
Ore_g45161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g032380.4.1 Solyc07g032380 Pentatricopeptide repeat-containing protein At5g21222... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 281 313
IPR002885 Pentatricopeptide_repeat 357 404
IPR002885 Pentatricopeptide_repeat 567 614
IPR002885 Pentatricopeptide_repeat 462 511
IPR002885 Pentatricopeptide_repeat 431 460
IPR002885 Pentatricopeptide_repeat 322 351
IPR002885 Pentatricopeptide_repeat 536 565
No external refs found!