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  5. Azfi_s0028.g023819

Azfi_s0028.g023819


Description : ROP-activating protein *(RenGAP) & original description: CDS=177-2807


Gene families : OG0001811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0028.g023819
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00197920 evm_27.TU.AmTr_v1... Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.05 OrthoFinder output from all 47 species
Adi_g087226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70602 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G041800.1 Ceric.11G041800 ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g01869 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01978 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003597001 REN1 Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g11140.1 REN1, LOC_Os03g11140 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g24180.1 LOC_Os03g24180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g39495 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16703 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03788 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13925 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo442380 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g30873 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19281 No alias ROP-activaTing protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036715_P004 REN1, Zm00001e036715 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 560 640
IPR001849 PH_domain 20 116
IPR000198 RhoGAP_dom 147 277
No external refs found!