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  5. Azfi_s0027.g023545

Azfi_s0027.g023545


Description : GARP subgroup PHL transcription factor & original description: CDS=114-1424


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0027.g023545

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00125480 KAN2,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT5G45580 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g006433 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g03610 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g01625 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14328.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15047 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g21846 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G024900.1 Ceric.22G024900 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g16600 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13705 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21970 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os08g33050.1 KAN, KAN1, LOC_Os08g33050 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Len_g56630 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g01284 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12599 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g25706 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19105 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08186 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13922 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007778 No alias not classified & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010896 No alias transcription factor *(CLAUSA) & original description: CDS=80-784 0.03 OrthoFinder output from all 47 species
Spa_g07140 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09479 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g47326 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005097_P001 KAN4, ATS, Zm00001e005097 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e006632_P003 Zm00001e006632 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 118
IPR025756 Myb_CC_LHEQLE 164 208
No external refs found!