Azfi_s0027.g023504


Description : not classified & original description: CDS=132-2867


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0027.g023504

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.03 OrthoFinder output from all 47 species
Adi_g005657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020425 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099198 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13180 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17237 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24238 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28362 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26204 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26965 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04252 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20132 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20359 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22058 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28718 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14074.t1 CRR22, Aspi01Gene14074 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20496.t1 CRR22, Aspi01Gene20496 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27806.t1 CRR2, Aspi01Gene27806 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0154.g053544 No alias ssDNA-binding protein *(OSB) & original description: CDS=137-355 0.03 OrthoFinder output from all 47 species
Cba_g07471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33383 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G041400.1 Ceric.01G041400 not classified & original description: pacid=50592429... 0.04 OrthoFinder output from all 47 species
Ceric.13G039400.1 Ceric.13G039400 not classified & original description: pacid=50635903... 0.04 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.03 OrthoFinder output from all 47 species
Ceric.38G035700.1 Ceric.38G035700 not classified & original description: pacid=50579678... 0.03 OrthoFinder output from all 47 species
Dac_g15344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30262 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33014 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33321 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39275 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44824 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g22354 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018597001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01019408001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g14748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10311934g0010 MEF22 Pentatricopeptide repeat-containing protein At1g15510,... 0.03 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g09805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04969 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04362 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59836 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006283 OTP82 not classified & original description: CDS=1-1473 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010845 No alias not classified & original description: CDS=1-381 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011851 OTP84 not classified & original description: CDS=1-2175 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020713 No alias not classified & original description: CDS=1-3843 0.04 OrthoFinder output from all 47 species
Sam_g37186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.03 OrthoFinder output from all 47 species
Solyc11g017370.3.1 Solyc11g017370 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12114 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 743 772
IPR002885 Pentatricopeptide_repeat 612 634
IPR002885 Pentatricopeptide_repeat 714 739
IPR002885 Pentatricopeptide_repeat 306 329
IPR002885 Pentatricopeptide_repeat 778 805
IPR002885 Pentatricopeptide_repeat 816 837
IPR002885 Pentatricopeptide_repeat 409 430
IPR002885 Pentatricopeptide_repeat 638 684
IPR002885 Pentatricopeptide_repeat 128 174
IPR002885 Pentatricopeptide_repeat 434 482
IPR002885 Pentatricopeptide_repeat 535 582
IPR002885 Pentatricopeptide_repeat 331 378
IPR002885 Pentatricopeptide_repeat 229 277
No external refs found!