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  5. Azfi_s0027.g023488

Azfi_s0027.g023488 (PTAC14)


Aliases : PTAC14

Description : cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14) & original description: CDS=110-1585


Gene families : OG0004603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0027.g023488

Target Alias Description ECC score Gene Family Method Actions
AT4G20130 PTAC14 plastid transcriptionally active 14 0.03 OrthoFinder output from all 47 species
Aev_g31785 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.02 OrthoFinder output from all 47 species
GSVIVT01012161001 PTAC14 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50980.1 PTAC14, LOC_Os05g50980 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Mp7g10810.1 PTAC14 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Smo126991 PTAC14 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 143 366
IPR015353 Rubisco_LSMT_subst-bd 450 508
No external refs found!