1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0026.g023366

Azfi_s0026.g023366


Description : not classified & original description: CDS=1-432


Gene families : OG0009554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009554_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0026.g023366

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011530 PSBE,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
ATCG00580 PSBE photosystem II reaction center protein E 0.1 OrthoFinder output from all 47 species
Ceric.02G014900.1 PSBE, Ceric.02G014900 component *(PsbL) of PS-II complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.05G050500.1 PSBE, Ceric.05G050500 component *(PsbL) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.1Z018800.1 PSBE, Ceric.1Z018800 component alpha *(PsbE) of PS-II cytochrome b559... 0.06 OrthoFinder output from all 47 species
Ceric.30G064400.1 PSBE, Ceric.30G064400 component *(PsbL) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G007300.1 PSBE, Ceric.38G007300 component alpha *(PsbE) of PS-II cytochrome b559... 0.06 OrthoFinder output from all 47 species
LOC_Os06g39728.1 LOC_Os06g39728 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.08 OrthoFinder output from all 47 species
LOC_Os08g15322.1 LOC_Os08g15322 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.08 OrthoFinder output from all 47 species
LOC_Os10g21298.1 LOC_Os10g21298 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.08 OrthoFinder output from all 47 species
Smo137822 PSBE Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
Solyc00g500021.1.1 PSBE, Solyc00g500021 component alpha/PsbE of PS-II cytochrome b559... 0.1 OrthoFinder output from all 47 species
Solyc00g500068.1.1 PSBE, Solyc00g500068 component alpha/PsbE of PS-II cytochrome b559... 0.1 OrthoFinder output from all 47 species
Solyc10g045230.1.1 PSBE, Solyc10g045230 component alpha/PsbE of PS-II cytochrome b559... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015288 porin activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0022829 wide pore channel activity IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR013082 PSII_cytb559_asu_lum 38 63
No external refs found!