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Aliases : CRR22
Description : not classified & original description: CDS=1-2235
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0026.g023333 | |
| Cluster | HCCA: Cluster_176 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00182540 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G43790 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g07720 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g18072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g25276 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g34560 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g40807 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g10470 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g17504 | OTP81 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g17609 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25481 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g31151 | EMB2758 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g35756 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g39533 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27256 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g11003 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene33231.t1 | CRR22, Aspi01Gene33231 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34804.t1 | Aspi01Gene34804 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007914 | EMB2758 | not classified & original description: CDS=1-2235 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009910 | EMB2758 | not classified & original description: CDS=1-1803 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011300 | No alias | not classified & original description: CDS=1-2337 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016134 | OTP84 | not classified & original description: CDS=1-2358 | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0102.g044571 | No alias | not classified & original description: CDS=1-2829 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g12869 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g19072 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08271 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g08636 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dde_g23238 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009866001 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01022230001 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036169001 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g24890.1 | LOC_Os05g24890 | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g30760.1 | LOC_Os10g30760 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23175 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34210 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g41721 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006451 | No alias | not classified & original description: CDS=1-639 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0063.g015638 | EMB2758 | not classified & original description: CDS=1-2175 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0099.g019605 | MEF19 | not classified & original description: CDS=1-1827 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13068 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g19760 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14308 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g23985 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g35237 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000621_P001 | CRR22, Zm00001e000621 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 180 | 228 |
| IPR002885 | Pentatricopeptide_repeat | 382 | 430 |
| IPR002885 | Pentatricopeptide_repeat | 586 | 633 |
| IPR002885 | Pentatricopeptide_repeat | 483 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 284 | 328 |
| IPR002885 | Pentatricopeptide_repeat | 661 | 685 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 175 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 150 |
| IPR002885 | Pentatricopeptide_repeat | 256 | 281 |
| No external refs found! |