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  5. Azfi_s0026.g023316

Azfi_s0026.g023316


Description : not classified & original description: CDS=130-2748


Gene families : OG0005210 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0026.g023316
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT2G18900 No alias Transducin/WD40 repeat-like superfamily protein 0.11 OrthoFinder output from all 47 species
Ceric.03G099700.1 Ceric.03G099700 not classified & original description: pacid=50571866... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.131 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre04.g215350 No alias No description available 0.11 OrthoFinder output from all 47 species
Dcu_g38097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030738001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os12g41620.1 LOC_Os12g41620 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g01894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428181g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_40164g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9860436g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g09630.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Ore_g05181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo166499 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g066410.4.1 Solyc07g066410 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e003211_P001 Zm00001e003211 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 288 322
IPR001680 WD40_repeat 45 86
No external refs found!