Solyc08g065490.3.1 (Solyc08g065490.3)


Aliases : Solyc08g065490.3

Description : 25.1 C1-metabolism.glycine hydroxymethyltransferase Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid. serine hydroxymethyltransferase 3 (SHM3)


Gene families : OG_01_0000425 (Gene family) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g065490.3.1
Cluster HCCA cluster: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AT4G32520 AtSHMT3, SHM3 serine hydroxymethyltransferase 3 0.05 Gene family
Cpa|evm.model.tig00000144.148 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
Cpa|evm.model.tig00001130.31 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
Cre09.g411900 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.06 Gene family
LOC_Os12g22030 Os12g0409000 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.02 Gene family
MA_730617g0010 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.03 Gene family
Zm00001d012247 GRMZM2G113959,... 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 78 468
No external refs found!