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  5. Azfi_s0024.g020370

Azfi_s0024.g020370


Description : not classified & original description: CDS=33-2867


Gene families : OG0002495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0024.g020370
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Spa_g49797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 816 862
IPR002885 Pentatricopeptide_repeat 214 262
IPR002885 Pentatricopeptide_repeat 312 359
IPR002885 Pentatricopeptide_repeat 615 644
IPR002885 Pentatricopeptide_repeat 688 710
IPR002885 Pentatricopeptide_repeat 514 543
IPR002885 Pentatricopeptide_repeat 887 912
IPR002885 Pentatricopeptide_repeat 189 212
IPR002885 Pentatricopeptide_repeat 389 415
IPR002885 Pentatricopeptide_repeat 587 608
IPR002885 Pentatricopeptide_repeat 486 505
IPR046848 E_motif 930 978
No external refs found!