Azfi_s0024.g020340


Description : not classified & original description: CDS=1-2319


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0024.g020340

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene49895.t1 CRR22, Aspi01Gene49895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52586.t1 Aspi01Gene52586 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57285.t1 Aspi01Gene57285 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G041000.1 Ceric.11G041000 not classified & original description: pacid=50594870... 0.02 OrthoFinder output from all 47 species
Ceric.13G050400.1 Ceric.13G050400 not classified & original description: pacid=50636404... 0.02 OrthoFinder output from all 47 species
Ceric.15G015100.1 CRR22, Ceric.15G015100 not classified & original description: pacid=50640379... 0.02 OrthoFinder output from all 47 species
Ceric.15G074900.1 Ceric.15G074900 not classified & original description: pacid=50640124... 0.05 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.03 OrthoFinder output from all 47 species
Ceric.27G013400.1 Ceric.27G013400 not classified & original description: pacid=50605328... 0.03 OrthoFinder output from all 47 species
Ceric.30G007900.1 Ceric.30G007900 not classified & original description: pacid=50608292... 0.01 OrthoFinder output from all 47 species
Ceric.30G024700.1 Ceric.30G024700 not classified & original description: pacid=50608167... 0.02 OrthoFinder output from all 47 species
Dcu_g06434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08759 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08951 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18657 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43123 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g47765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18041 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30131 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001288 No alias not classified & original description: CDS=1-3081 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002787 No alias not classified & original description: CDS=1-2232 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002944 No alias not classified & original description: CDS=1-2634 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002995 DOT4 not classified & original description: CDS=1-2349 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006214 No alias not classified & original description: CDS=115-2940 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009486 No alias not classified & original description: CDS=1-3465 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013942 No alias not classified & original description: CDS=1-3669 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014007 No alias not classified & original description: CDS=1-1872 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014379 CRR22 not classified & original description: CDS=1-2430 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016963 No alias not classified & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017584 No alias not classified & original description: CDS=1-3165 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019669 OTP84 not classified & original description: CDS=1-1971 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021987 No alias not classified & original description: CDS=1-1590 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023714 No alias not classified & original description: CDS=1-2772 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026755 CRR22 not classified & original description: CDS=1-2307 0.02 OrthoFinder output from all 47 species
Sam_g12346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35204 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 214 261
IPR002885 Pentatricopeptide_repeat 417 463
IPR002885 Pentatricopeptide_repeat 316 364
IPR002885 Pentatricopeptide_repeat 517 566
IPR002885 Pentatricopeptide_repeat 275 314
IPR002885 Pentatricopeptide_repeat 621 644
IPR002885 Pentatricopeptide_repeat 693 717
IPR002885 Pentatricopeptide_repeat 593 617
IPR002885 Pentatricopeptide_repeat 88 113
IPR002885 Pentatricopeptide_repeat 659 681
IPR002885 Pentatricopeptide_repeat 117 142
IPR002885 Pentatricopeptide_repeat 391 416
No external refs found!