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  5. Azfi_s0022.g016230

Azfi_s0022.g016230 (ATH1, ATATH1, ABCA2)


Aliases : ATH1, ATATH1, ABCA2

Description : subfamily ABCA transporter & original description: CDS=354-3422


Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0022.g016230
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT2G41700 ABCA1, AtABCA1 ATP-binding cassette A1 0.03 OrthoFinder output from all 47 species
AT5G61690 ATH15, ATATH15 ABC2 homolog 15 0.05 OrthoFinder output from all 47 species
AT5G61730 ATH11, ATATH11 ABC2 homolog 11 0.03 OrthoFinder output from all 47 species
Aev_g01527 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36721.t1 ATH1, ATATH1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G040100.1 ATH1, ATATH1,... subfamily ABCA transporter & original description:... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.66 ATH1, ATATH1, ABCA2 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre03.g151400 ABCA1, AtABCA1 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Cre14.g613950 ATH1, ATATH1, ABCA2 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g10442 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20236 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g30740.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Mp3g20090.1 ABCA1, AtABCA1 subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Mp7g18500.1 ATH1, ATATH1, ABCA2 fatty acid transporter (ABCA). subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Msp_g36286 ATH15, ATATH15 subfamily ABCA transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08430 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34266 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08580 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06475 ATH15, ATATH15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010105 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: CDS=434-3037 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010133 ATH1, ATATH1, ABCA2 not classified & original description: CDS=111-2057 0.04 OrthoFinder output from all 47 species
Sam_g25161 No alias subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo76005 ATH1, ATATH1, ABCA2 Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Solyc03g113070.4.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species
Solyc04g015970.3.1 ABCA1, AtABCA1,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Solyc06g070960.3.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Spa_g22954 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004192_P001 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 584 728
No external refs found!