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  5. Azfi_s0022.g016133

Azfi_s0022.g016133


Description : ssDNA-binding protein *(OSB) & original description: CDS=1-2574


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0022.g016133

Target Alias Description ECC score Gene Family Method Actions
Adi_g057717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21870.t1 EMB2758, Aspi01Gene21870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07069 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03104 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000958 No alias not classified & original description: CDS=1-3216 0.04 OrthoFinder output from all 47 species
Sam_g12389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo134538 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Tin_g43907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 734 758
IPR002885 Pentatricopeptide_repeat 428 451
IPR002885 Pentatricopeptide_repeat 351 398
IPR002885 Pentatricopeptide_repeat 249 296
IPR002885 Pentatricopeptide_repeat 555 602
IPR002885 Pentatricopeptide_repeat 147 194
IPR002885 Pentatricopeptide_repeat 657 705
IPR002885 Pentatricopeptide_repeat 454 500
No external refs found!