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  5. Azfi_s0022.g016084

Azfi_s0022.g016084


Description : regulatory RNA helicase *(RH20/RH30) of virus replication & original description: CDS=148-1797


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0022.g016084
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Als_g08745 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Als_g22206 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33054 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68173 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10540 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17995 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016847001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder output from all 47 species
LOC_Os01g36860.1 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Lfl_g13618 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Ore_g02786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19068 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Pir_g15938 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14840 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g112350.4.1 Solyc03g112350 pre-mRNA splicing regulator (DDX5) 0.03 OrthoFinder output from all 47 species
Spa_g56211 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020972_P005 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 360 469
IPR011545 DEAD/DEAH_box_helicase_dom 153 322
No external refs found!