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  5. Azfi_s0021.g015765

Azfi_s0021.g015765


Description : nucleoporin of nuclear pore complex *(NUP50) & original description: CDS=1-1530


Gene families : OG0003460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0021.g015765

Target Alias Description ECC score Gene Family Method Actions
Cba_g68744 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.02 OrthoFinder output from all 47 species
Gb_12922 No alias NUP50 nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Mp5g18610.1 No alias NUP50 nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Zm00001e020069_P002 Zm00001e020069 NUP50 nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 380 491
IPR015007 NUP2/50/61 13 59
No external refs found!