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  5. Azfi_s0020.g015483

Azfi_s0020.g015483 (VTI12, VTI1B, ATVTI12)


Aliases : VTI12, VTI1B, ATVTI12

Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: CDS=1-669


Gene families : OG0005736 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005736_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0020.g015483
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0067.g036218 No alias not classified & original description: CDS=1-543 0.04 OrthoFinder output from all 47 species
Azfi_s0071.g036814 No alias not classified & original description: CDS=399-842 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045768 No alias not classified & original description: CDS=1-270 0.06 OrthoFinder output from all 47 species
Azfi_s0161.g054082 No alias not classified & original description: CDS=1-324 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 68 148
No external refs found!