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  5. Azfi_s0019.g015005

Azfi_s0019.g015005


Description : E3 ubiquitin ligase & original description: CDS=415-1941


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0019.g015005
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT5G05230 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g020571 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20302 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32250 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65940.t1 Aspi01Gene65940 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05312 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29971 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Gb_03616 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g18974 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26140 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429276g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g09636 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24331 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49248 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16841 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!