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  5. Azfi_s0015.g014002

Azfi_s0015.g014002


Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: CDS=1-2352


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0015.g014002

Target Alias Description ECC score Gene Family Method Actions
Adi_g049127 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Adi_g075797 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Adi_g081004 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aev_g05467 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aob_g06734 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Azfi_s0524.g075292 ATSZF1, SZF1 regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ceric.24G053600.1 Ceric.24G053600 regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Cre01.g008100 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Cre03.g146267 ATTZF1, ATCTH RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Dac_g08831 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dac_g10045 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Dcu_g21498 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dcu_g36120 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dde_g48585 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ehy_g09166 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ehy_g18498 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
GSVIVT01013901001 PEI1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01015265001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.06 OrthoFinder output from all 47 species
LOC_Os03g49170.1 LOC_Os03g49170 mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g10670.1 LOC_Os05g10670 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Len_g21927 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Pir_g00662 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g39344 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pnu_g25039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43468 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017049 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Solyc01g087170.3.1 Solyc01g087170 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 351 371
IPR002110 Ankyrin_rpt 101 182
No external refs found!