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  5. Ehy_g02921

Ehy_g02921


Description : not classified & original description: none


Gene families : OG0006545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g02921

Target Alias Description ECC score Gene Family Method Actions
AT3G23020 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g014933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35344.t1 Aspi01Gene35344 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G000500.1 Ceric.27G000500 not classified & original description: pacid=50606226... 0.03 OrthoFinder output from all 47 species
Dac_g22039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g06710.1 LOC_Os03g06710 Pentatricopeptide repeat-containing protein At3g23020... 0.02 OrthoFinder output from all 47 species
LOC_Os07g28900.1 LOC_Os07g28900 Pentatricopeptide repeat-containing protein At1g73710... 0.02 OrthoFinder output from all 47 species
Msp_g13366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo77736 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 506 552
IPR002885 Pentatricopeptide_repeat 856 899
IPR002885 Pentatricopeptide_repeat 157 204
IPR002885 Pentatricopeptide_repeat 600 657
IPR002885 Pentatricopeptide_repeat 718 738
IPR002885 Pentatricopeptide_repeat 229 256
IPR002885 Pentatricopeptide_repeat 754 783
IPR002885 Pentatricopeptide_repeat 685 712
IPR002885 Pentatricopeptide_repeat 928 954
IPR033443 PPR_long 312 410
No external refs found!