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  5. Azfi_s0015.g013704

Azfi_s0015.g013704


Description : HYL1-interacting scaffold factor (CARP9) of miRNA biogenesis pathway & original description: CDS=218-4474


Gene families : OG0002982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0015.g013704

Target Alias Description ECC score Gene Family Method Actions
Adi_g067814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09425 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.05 OrthoFinder output from all 47 species
Ehy_g30845 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01016889001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g24720 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.05 OrthoFinder output from all 47 species
MA_113519g0010 CTF18 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g06020.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g121380.3.1 Solyc03g121380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR010844 Occludin_ELL 1314 1412
No external refs found!