Azfi_s0013.g013442 (ATWBC11, ABCG11, DSO,...)

Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : not classified & original description: CDS=1-1776

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0013.g013442
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT1G51460	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
Aev_g39654	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g43358	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02213	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene24079.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0123.g048394	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=209-2359	0.05	OrthoFinder output from all 47 species
LOC_Os09g03939.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g13334	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g19182	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g29286	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo171782	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	301	512

External Links

No external refs found!