Aliases : AT4CL2, 4CL2
Description : EC_6.2 ligase forming carbon-sulfur bond & original description: CDS=320-1834
Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00217510 | ACOS5,... | 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00025p00217630 | ACOS5,... | 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT1G62940 | ACOS5 | acyl-CoA synthetase 5 | 0.03 | OrthoFinder output from all 47 species | |
AT1G65060 | 4CL3 | 4-coumarate:CoA ligase 3 | 0.06 | OrthoFinder output from all 47 species | |
Adi_g103472 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Aev_g02337 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g14525 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g06612 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g17905 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g20296 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g03267 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G038600.1 | 4CL3, Ceric.12G038600 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G077900.1 | 4CL3, Ceric.12G077900 | not classified & original description: pacid=50601305... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.17G083800.1 | AT4CL2, 4CL2,... | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.33G041000.1 | ACOS5, Ceric.33G041000 | acyl-CoA synthetase *(ACS5) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g07445 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g07017 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g09728 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.09 | OrthoFinder output from all 47 species | |
Dde_g24331 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g31145 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dde_g31505 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01024400001 | 4CL3 | 4-coumarate--CoA ligase 2 OS=Glycine max | 0.03 | OrthoFinder output from all 47 species | |
Gb_03647 | 4CL1, AT4CL1, 4CL.1 | 4-coumarate--CoA ligase OS=Pinus taeda... | 0.03 | OrthoFinder output from all 47 species | |
Gb_40573 | 4CL3 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g46970.1 | 4CL3, LOC_Os02g46970 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g24530.1 | ACOS5, LOC_Os04g24530 | acyl-CoA synthetase (ACS5) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g44620.1 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g14760.1 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g06994 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
MA_109119g0010 | 4CL3 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | OrthoFinder output from all 47 species | |
MA_70509g0010 | 4CL1, AT4CL1, 4CL.1 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.05 | OrthoFinder output from all 47 species | |
Msp_g00641 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g42310 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g08794 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g08302 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0149.g023264 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g51306 | No alias | acyl-CoA synthetase *(ACS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo173133 | 4CL3 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
Smo177393 | AT4CL2, 4CL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g088710.3.1 | ACOS5, Solyc02g088710 | acyl-CoA synthetase (ACS5) | 0.05 | OrthoFinder output from all 47 species | |
Solyc03g097030.3.1 | 4CL3, Solyc03g097030 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.07 | OrthoFinder output from all 47 species | |
Solyc03g117870.3.1 | AT4CL2, 4CL2,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g008360.2.1 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g07442 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g13836 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e008138_P001 | ACOS5, Zm00001e008138 | acyl-CoA synthetase (ACS5) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013798_P002 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016374_P001 | ACOS5, Zm00001e016374 | acyl-CoA synthetase (ACS5) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023286_P002 | 4CL3, Zm00001e023286 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e037698_P001 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0050897 | cobalt ion binding | IEP | HCCA |
BP | GO:0051202 | phytochromobilin metabolic process | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000873 | AMP-dep_Synth/Lig_com | 41 | 453 |
No external refs found! |