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  5. Azfi_s0012.g012956

Azfi_s0012.g012956


Description : not classified & original description: CDS=94-510


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0012.g012956
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00265500 HIPP22,... Heavy metal-associated isoprenylated plant protein 22... 0.02 OrthoFinder output from all 47 species
AT5G27690 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g31942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59197.t1 Aspi01Gene59197 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_05090 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_12907 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_20921 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
Gb_21295 No alias Heavy metal-associated isoprenylated plant protein 45... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32814.1 SLAH3, LOC_Os02g32814 copper chaperone (CCH) 0.04 OrthoFinder output from all 47 species
LOC_Os03g02860.1 LOC_Os03g02860 Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
MA_13573g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_20279g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
Mp2g01720.1 ATX1, ATATX1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g18260.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26776 NAKR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001743 No alias not classified & original description: CDS=1-801 0.03 OrthoFinder output from all 47 species
Smo174037 No alias Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
Smo446343 No alias Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.02 OrthoFinder output from all 47 species
Solyc03g043640.3.1 HIPP21, Solyc03g043640 Heavy metal-associated isoprenylated plant protein 21... 0.04 OrthoFinder output from all 47 species
Spa_g18793 CCH copper chaperone *(ATX/CCH) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e004204_P001 Zm00001e004204 Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
Zm00001e019945_P001 Zm00001e019945 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e023241_P002 Zm00001e023241 Heavy metal-associated isoprenylated plant protein 45... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 8 60
No external refs found!