Azfi_s0012.g012932

Description : nucleoporin of nuclear pore complex *(NUP98) & original description: CDS=1-2988

Gene families : OG0001205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001205_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0012.g012932
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
Ceric.23G078300.1	Ceric.23G078300	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01019716001	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
GSVIVT01031347001	No alias	Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_29033	NUP96, PRE, SAR3, MOS3	NUP96 scaffold nucleoporin of nuclear pore complex	0.02	OrthoFinder output from all 47 species
LOC_Os01g28690.2	LOC_Os01g28690	NUP98 nucleoporin of nuclear pore complex	0.02	OrthoFinder output from all 47 species
LOC_Os12g06890.1	LOC_Os12g06890	NUP98 nucleoporin of nuclear pore complex	0.03	OrthoFinder output from all 47 species
Mp2g01050.1	NUP96, PRE, SAR3, MOS3	NUP96 scaffold nucleoporin of nuclear pore complex....	0.03	OrthoFinder output from all 47 species
Ppi_g03244	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.02	OrthoFinder output from all 47 species
Solyc04g007280.3.1	Solyc04g007280	NUP98 nucleoporin of nuclear pore complex	0.05	OrthoFinder output from all 47 species
Zm00001e020801_P003	Zm00001e020801	NUP98 nucleoporin of nuclear pore complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017056	structural constituent of nuclear pore	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007230	Nup98_auto-Pept-S59_dom	842	988

External Links

No external refs found!