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  5. Azfi_s0011.g012632

Azfi_s0011.g012632


Description : not classified & original description: CDS=1-3870


Gene families : OG0007339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0011.g012632

Target Alias Description ECC score Gene Family Method Actions
AT3G28875 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g58715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_9890V3.1 Pp3c3_9890 Ankyrin repeat family protein 0.02 OrthoFinder output from all 47 species
Spa_g49025 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e002969_P002 Zm00001e002969 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR025605 OST-HTH/LOTUS_dom 835 898
IPR000571 Znf_CCCH 652 677
IPR000504 RRM_dom 701 770
IPR002110 Ankyrin_rpt 227 323
IPR002110 Ankyrin_rpt 515 596
No external refs found!