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Aliases : OTP84
Description : not classified & original description: CDS=1-2100
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G37380 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004372 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g043528 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g26256 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g32458 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g36211 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06136 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07446 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23735 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30598 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30855 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62017 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22510 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g33010 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03152.t1 | Aspi01Gene03152 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene08005.t1 | Aspi01Gene08005 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009022 | No alias | not classified & original description: CDS=1-2334 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023505 | No alias | not classified & original description: CDS=32-2620 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042774 | No alias | not classified & original description: CDS=1-2433 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1334.g101644 | No alias | not classified & original description: CDS=1-3543 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06580 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07181 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07355 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16282 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29991 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G121800.1 | Ceric.01G121800 | not classified & original description: pacid=50593016... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G033100.1 | Ceric.02G033100 | not classified & original description: pacid=50586102... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G103400.1 | Ceric.04G103400 | not classified & original description: pacid=50630509... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G086200.1 | OTP84, Ceric.11G086200 | not classified & original description: pacid=50595902... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G049100.1 | Ceric.13G049100 | not classified & original description: pacid=50635384... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G076400.1 | Ceric.13G076400 | not classified & original description: pacid=50635248... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G064000.1 | Ceric.14G064000 | not classified & original description: pacid=50634231... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G067900.1 | CRR22, Ceric.14G067900 | not classified & original description: pacid=50634625... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G054500.1 | CRR22, Ceric.15G054500 | not classified & original description: pacid=50639954... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z005100.1 | Ceric.1Z005100 | not classified & original description: pacid=50567700... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G030200.1 | Ceric.23G030200 | not classified & original description: pacid=50609682... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G026700.1 | Ceric.24G026700 | not classified & original description: pacid=50628649... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.25G047500.1 | Ceric.25G047500 | not classified & original description: pacid=50594463... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G068300.1 | DOT4, Ceric.28G068300 | not classified & original description: pacid=50570176... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G027200.1 | OTP86, Ceric.31G027200 | not classified & original description: pacid=50574199... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G011500.1 | Ceric.39G011500 | not classified & original description: pacid=50582697... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000851.30 | No alias | Pentatricopeptide repeat-containing protein At5g61990,... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001038.5 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18563 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18570 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g33204 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08380 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08885 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16664 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g32689 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g38585 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45945 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50144 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05920 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003804001 | CRR22 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011887001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018597001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021576001 | BRCA1, ATBRCA1 | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_30949g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_681272g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25707 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g33983 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g36270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g40957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47228 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17268 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g01804 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g53095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57724 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g60035 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63850 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15455 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17077 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22601 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26686 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29380 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53021 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53979 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004867 | No alias | not classified & original description: CDS=342-1943 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004955 | No alias | not classified & original description: CDS=1-2634 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g011031 | No alias | not classified & original description: CDS=1-2574 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0048.g013552 | No alias | not classified & original description: CDS=1-2598 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013907 | No alias | not classified & original description: CDS=1-1875 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0066.g016088 | No alias | not classified & original description: CDS=1-1020 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0109.g020573 | No alias | not classified & original description: CDS=184-1233 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0200.g025598 | No alias | not classified & original description: CDS=1-3840 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0218.g026116 | No alias | not classified & original description: CDS=1-2901 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13564 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19760 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g19797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27765 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38969 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49275 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g100340.4.1 | Solyc01g100340 | Pentatricopeptide repeat-containing protein At1g09190... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g01489 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g06005 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17936 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g19369 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g27693 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28927 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g52254 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g55591 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17887 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30348 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31184 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44238 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007042_P001 | Zm00001e007042 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015695_P001 | Zm00001e015695 | Pentatricopeptide repeat-containing protein At4g16835,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028330_P001 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030553_P001 | Zm00001e030553 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 299 | 321 |
| IPR002885 | Pentatricopeptide_repeat | 605 | 630 |
| IPR002885 | Pentatricopeptide_repeat | 197 | 217 |
| IPR002885 | Pentatricopeptide_repeat | 503 | 526 |
| IPR002885 | Pentatricopeptide_repeat | 95 | 114 |
| IPR002885 | Pentatricopeptide_repeat | 528 | 576 |
| IPR002885 | Pentatricopeptide_repeat | 426 | 473 |
| IPR002885 | Pentatricopeptide_repeat | 223 | 270 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 371 |
| IPR002885 | Pentatricopeptide_repeat | 120 | 167 |
| No external refs found! |