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  5. Azfi_s0009.g011701

Azfi_s0009.g011701 (VFB3)


Aliases : VFB3

Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: CDS=1-1404


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0009.g011701

Target Alias Description ECC score Gene Family Method Actions
AT3G50080 VFB2 VIER F-box proteine 2 0.03 OrthoFinder output from all 47 species
Adi_g024460 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Adi_g109116 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.19G024600.1 VFB4, SKIP2,... substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
GSVIVT01000227001 VFB2 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os04g42670.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016647 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 411 432
IPR001611 Leu-rich_rpt 152 176
IPR001810 F-box_dom 59 88
No external refs found!