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  5. Azfi_s0008.g011499

Azfi_s0008.g011499 (MURE, PDE316, ATMURE)


Aliases : MURE, PDE316, ATMURE

Description : cofactor of plastid-encoded RNA polymerase *(PAP11/MURE) & original description: CDS=1-2685


Gene families : OG0004194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0008.g011499
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00236210 MURE, PDE316,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.08 OrthoFinder output from all 47 species
AT1G63680 MURE, PDE316, ATMURE acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.06 OrthoFinder output from all 47 species
Als_g09620 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Cba_g03909 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 OrthoFinder output from all 47 species
Ceric.37G004600.1 MURE, PDE316,... cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.06 OrthoFinder output from all 47 species
Ehy_g03961 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
GSVIVT01019746001 MURE, PDE316, ATMURE RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 OrthoFinder output from all 47 species
Lfl_g03366 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 OrthoFinder output from all 47 species
Mp6g20740.1 MURE, PDE316, ATMURE PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species
Nbi_g02324 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 OrthoFinder output from all 47 species
Ore_g33830 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
Pp3c24_18820V3.1 MURE, PDE316,... acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.01 OrthoFinder output from all 47 species
Sam_g51453 No alias cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Solyc08g081170.4.1 MURE, PDE316,... PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Zm00001e037912_P001 MURE, PDE316,... PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR013221 Mur_ligase_cen 437 638
IPR004101 Mur_ligase_C 659 742
No external refs found!