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  5. Azfi_s0007.g011089

Azfi_s0007.g011089


Description : regulatory protein *(RGG) of mRNA quality control & original description: CDS=139-1320


Gene families : OG0000880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0007.g011089
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Adi_g060796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g51180.1 LOC_Os05g51180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g13836 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Nbi_g09170 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Pir_g04627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09394 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Zm00001e019958_P002 Zm00001e019958 RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006861 HABP4_PAIRBP1-bd 165 278
IPR019084 Stm1-like_N 1 75
No external refs found!