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  5. Azfi_s0007.g010880

Azfi_s0007.g010880 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: CDS=1-2943


Gene families : OG0012787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0007.g010880

Target Alias Description ECC score Gene Family Method Actions
Als_g07329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G033000.1 Ceric.32G033000 not classified & original description: pacid=50597405... 0.02 OrthoFinder output from all 47 species
Dac_g07542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 156 182
IPR002885 Pentatricopeptide_repeat 899 924
IPR002885 Pentatricopeptide_repeat 561 585
IPR002885 Pentatricopeptide_repeat 86 112
IPR002885 Pentatricopeptide_repeat 663 683
IPR002885 Pentatricopeptide_repeat 801 825
IPR002885 Pentatricopeptide_repeat 187 214
IPR002885 Pentatricopeptide_repeat 360 380
IPR002885 Pentatricopeptide_repeat 863 889
IPR002885 Pentatricopeptide_repeat 259 284
IPR002885 Pentatricopeptide_repeat 588 634
IPR002885 Pentatricopeptide_repeat 385 432
IPR002885 Pentatricopeptide_repeat 285 331
IPR002885 Pentatricopeptide_repeat 688 727
IPR002885 Pentatricopeptide_repeat 487 533
No external refs found!