1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0006.g010520

Azfi_s0006.g010520


Description : not classified & original description: CDS=281-2227


Gene families : OG0000289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000289_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g010520
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00154770 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
Adi_g056809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50071.t1 Aspi01Gene50071 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023502 No alias not classified & original description: CDS=1-603 0.05 OrthoFinder output from all 47 species
Dde_g03353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030035001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_13521 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os08g41280.1 LOC_Os08g41280 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Msp_g13892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41469 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR006593 Cyt_b561/ferric_Rdtase_TM 468 589
IPR045265 AIR12_DOMON 121 220
IPR045265 AIR12_DOMON 347 447
No external refs found!