1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0006.g010490

Azfi_s0006.g010490


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: CDS=1-1083


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g010490

Target Alias Description ECC score Gene Family Method Actions
AT3G60080 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g019630 ATCRT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03081 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0132.g049293 No alias not classified & original description: CDS=1-1575 0.04 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.04 OrthoFinder output from all 47 species
Ceric.32G049400.1 Ceric.32G049400 not classified & original description: pacid=50598110... 0.05 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g01200.1 LOC_Os06g01200 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10800.1 LOC_Os06g10800 Probable E3 ubiquitin-protein ligase RHC1A... 0.04 OrthoFinder output from all 47 species
LOC_Os08g38060.1 LOC_Os08g38060 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g07549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27734 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.06 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g018050.1.1 Solyc05g018050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Tin_g14563 No alias RING-H2-class BTL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 204 245
IPR039525 RNF126-like_zinc-ribbon 10 50
No external refs found!