Description : pectin methylesterase & original description: CDS=155-1288
Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0006.g010419 | |
Cluster | HCCA: Cluster_91 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00027p00247950 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g20602 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0108.g045229 | No alias | pectin methylesterase & original description: CDS=1-615 | 0.02 | OrthoFinder output from all 47 species | |
Ceric.10G069000.1 | Ceric.10G069000 | pectin methylesterase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g42904 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01013832001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01031250001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
Gb_17798 | No alias | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g44600.1 | LOC_Os05g44600 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
Len_g12523 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp5g03920.1 | No alias | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
Mp5g03930.1 | No alias | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 88 | 364 |
No external refs found! |