Aliases : SAR1, ATNUP160, NUP160
Description : scaffold nucleoporin of nuclear pore complex *(NUP160) & original description: CDS=116-4555
Gene families : OG0004742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0006.g010410 | |
Cluster | HCCA: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.32G022400.1 | SAR1, ATNUP160,... | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g04055 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015912001 | SAR1, ATNUP160, NUP160 | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g04970.1 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
MA_10430989g0010 | SAR1, ATNUP160, NUP160 | Nuclear pore complex protein NUP160 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436566g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp8g11350.1 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
Msp_g14433 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g102540.3.1 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g102550.4.1 | SAR1, ATNUP160,... | Nuclear pore complex protein NUP160 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013640_P002 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051170 | import into nucleus | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR035192 | NUP160 | 553 | 733 |
No external refs found! |