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  5. Azfi_s0006.g010301

Azfi_s0006.g010301 (ATPARP2, PARP2)


Aliases : ATPARP2, PARP2

Description : EC_2.4 glycosyltransferase & original description: CDS=1-3096


Gene families : OG0001236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g010301

Target Alias Description ECC score Gene Family Method Actions
Ala_g26958 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02320 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g45048 ATPARP2, PARP2 protein ADP-ribosyltransferase *(PARP) & original... 0.03 OrthoFinder output from all 47 species
Ore_g19429 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0527.g027464 ATPARP2, PARP2 not classified & original description: CDS=1-597 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR012982 PADR1 292 341
IPR008893 WGR_domain 526 603
IPR012317 Poly(ADP-ribose)pol_cat_dom 825 1025
IPR001510 Znf_PARP 102 175
IPR001510 Znf_PARP 11 73
IPR001357 BRCT_dom 398 484
IPR004102 Poly(ADP-ribose)pol_reg_dom 682 811
No external refs found!