1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0006.g010179

Azfi_s0006.g010179


Description : not classified & original description: CDS=245-2059


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g010179
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00089p00083270 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene19661.t1 Aspi01Gene19661 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53127.t1 Aspi01Gene53127 A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.03 OrthoFinder output from all 47 species
Cba_g68956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006373001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Nbi_g39402 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g36842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000749 No alias not classified & original description: CDS=1079-3364 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026164 No alias not classified & original description: CDS=287-2665 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0742.g027667 No alias not classified & original description: CDS=662-2452 0.04 OrthoFinder output from all 47 species
Sam_g48272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo409423 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo412562 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc06g075690.3.1 Solyc06g075690 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g06916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016540 protein autoprocessing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 28 303
No external refs found!