Azfi_s0006.g010006

Description : R-loop reader protein *(ALBA1/2) & original description: CDS=302-715

Gene families : OG0001187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001187_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0006.g010006

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000383.54	No alias	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Cre09.g401600	No alias	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Dde_g27956	No alias	R-loop reader protein *(ALBA1/2) & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os02g10810.1	LOC_Os02g10810	R-loop reader protein (ALBA1/2)	0.03	OrthoFinder output from all 47 species
Smo86023	No alias	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Tin_g30398	No alias	R-loop reader protein *(ALBA1/2) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0010011	auxin binding	IEP	HCCA
MF	GO:0042562	hormone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002775	DNA/RNA-bd_Alba-like	30	91

External Links

No external refs found!