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  5. Azfi_s0006.g009982

Azfi_s0006.g009982 (RHF2A)


Aliases : RHF2A

Description : regulatory E3 ubiquitin ligase *(RHF) & original description: CDS=234-1235


Gene families : OG0001882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g009982

Target Alias Description ECC score Gene Family Method Actions
AT5G22000 RHF2A RING-H2 group F2A 0.03 OrthoFinder output from all 47 species
Gb_16911 RHF2A E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os11g36430.3 RHF2A, LOC_Os11g36430 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g11714 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Ore_g09917 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g03452 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g073860.2.1 RHF2A, Solyc06g073860 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g073880.3.1 RHF2A, Solyc06g073880 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 20 64
No external refs found!