Aliases : UPL7
Description : E3 ubiquitin ligase *(UPL6) & original description: CDS=1-3648
Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0006.g009688 | |
Cluster | HCCA: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G53090 | UPL7 | ubiquitin-protein ligase 7 | 0.04 | OrthoFinder output from all 47 species | |
Aev_g04174 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene18054.t2 | UPL6, Aspi01Gene18054 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G020700.1 | UPL6, Ceric.05G020700 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.1Z062300.1 | UPL7, Ceric.1Z062300 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g02012 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033734001 | UPL7 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01034942001 | UPL6 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04194 | UPL6 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g06690.1 | UPL6, LOC_Os05g06690 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Mp7g02100.1 | UPL7 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0011.g005368 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: CDS=254-3667 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16308 | No alias | E3 ubiquitin ligase *(UPL6) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e031128_P003 | UPL6, Zm00001e031128 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039899_P001 | UPL6, Zm00001e039899 | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000569 | HECT_dom | 902 | 1215 |
No external refs found! |