1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0006.g009688

Azfi_s0006.g009688 (UPL7)


Aliases : UPL7

Description : E3 ubiquitin ligase *(UPL6) & original description: CDS=1-3648


Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0006.g009688
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT3G53090 UPL7 ubiquitin-protein ligase 7 0.04 OrthoFinder output from all 47 species
Aev_g04174 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18054.t2 UPL6, Aspi01Gene18054 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G020700.1 UPL6, Ceric.05G020700 E3 ubiquitin ligase *(UPL6) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.1Z062300.1 UPL7, Ceric.1Z062300 E3 ubiquitin ligase *(UPL6) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g02012 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033734001 UPL7 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01034942001 UPL6 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_04194 UPL6 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
LOC_Os05g06690.1 UPL6, LOC_Os05g06690 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Mp7g02100.1 UPL7 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005368 UPL7 E3 ubiquitin ligase *(UPL6) & original description: CDS=254-3667 0.03 OrthoFinder output from all 47 species
Sam_g16308 No alias E3 ubiquitin ligase *(UPL6) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e031128_P003 UPL6, Zm00001e031128 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Zm00001e039899_P001 UPL6, Zm00001e039899 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 902 1215
No external refs found!