Azfi_s0005.g009437 (PUB8, B80)

Aliases : PUB8, B80

Description : not classified & original description: CDS=1-1359

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0005.g009437
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
AT5G01830	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Len_g03070	ATPUB17, PUB17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_133008g0010	PUB14, ATPUB14	U-box domain-containing protein 14 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ppi_g14332	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021169	No alias	not classified & original description: CDS=1-882	0.04	OrthoFinder output from all 47 species
Solyc03g114160.1.1	Solyc03g114160	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
Zm00001e034012_P001	Zm00001e034012	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	77	147

External Links

No external refs found!